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Publications

Home - Research - Publications

  • 2024
  • 2023
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  • Previous publications

Variants in the DDX6-CXCR5 autoimmune disease risk locus influence the regulatory network in immune cells and salivary gland.

Authors: Wiley MM, Radziszewski M, Khatri B, Joachims ML, Tessneer KL, Stolarczyk AM, Yao S, Li J, Pritchett-Frazee C, Johnston AA, Rasmussen A, Anaya JM, Aqrawi LA, Bae SC, Baecklund E, Björk A, Brun JG, Bucher SM, Dand N, Eloranta ML, Engelke F, Forsblad-d'Elia H, Fugmann C, Glenn SB, Gong C, Gottenberg JE, Hammenfors D, Imgenberg-Kreuz J, Jensen JL, Johnsen SJA, Jonsson MV, Kelly JA, Khanam S, Kim K, Kvarnström M, Mandl T, Martín J, Morris DL, Nocturne G, Norheim KB, Olsson P, Palm Ø, Pers JO, Rhodus NL, Sjöwall C, Skarstein K, Taylor KE, Tombleson P, Thorlacius GE, Venuturupalli SR, Vital EM, Wallace DJ, Radfar L, Brennan MT, James JA, Scofield RH, Gaffney PM, Criswell LA, Jonsson R, Appel S, Eriksson P, Bowman SJ, Omdal R, Rönnblom L, Warner BM, Rischmueller M, Witte T, Farris AD, Mariette X, Shiboski CH, Sjögren’s International Collaborative Clinical Alliance (SICCA), Wahren-Herlenius M, Alarcón-Riquelme ME, PRECISESADS Clinical Consortium, Ng WF, UK Primary Sjögren’s Syndrome Registry, Sivils KL, Guthridge JM, Adrianto I, Vyse TJ, Tsao BP, Nordmark G, Lessard CJ

05/2025 - Annals of the rheumatic diseases

Machine Learning Analysis of Whole-Blood Transcriptomics Data in Rheumatoid Arthritis Patients Treated with Adalimumab Identifies Predictive Biomarkers of Response.

Authors: Yap CF, Nair N, Morgan AW, Isaacs JD, Wilson AG, Hyrich K, Barturen G, Riva-Torrubia M, Gut M, Gut I, Alarcón Riquelme ME, Barton A, Plant D

05/2025 - Arthritis & rheumatology (Hoboken, N.J.)

Loss of the extracellular protease ADAMTS1 reveals an antitumorigenic program involving the action of NIDOGEN-1 on macrophage polarization.

Authors: Caracuel-Peramos R, Rodríguez-Baena FJ, Redondo-García S, Villatoro-García JA, García-Muñoz A, Peris-Torres C, Plaza-Calonge MDC, Rubio-Gayarre A, López-Millán B, Ricciardelli C, Russell DL, Carmona-Sáez P, Rodríguez-Manzaneque JC

12/2025 - Oncoimmunology

New IgG and IgA autoantibody specificities against DNA-binding and RNA-binding proteins discriminate systemic lupus erythematosus from health and non-lupus autoimmunity-could anti-LIN28A enhance precision in diagnostics?

Authors: Parodis I, Lagutkin D, Lindblom J, Idborg H, Beretta L, Borghi MO, PRECISESADS Clinical Consortium, Peyper JM, Barturen G, Jakobsson PJ, Alarcón-Riquelme ME, Sherina N, Nikolopoulos D

05/2025 - Annals of the rheumatic diseases

The potential application of stroma modulation in targeting tumor cells: Focus on pancreatic cancer and breast cancer models.

Authors: Roscigno G, Jacobs S, Toledo B, Borea R, Russo G, Pepe F, Serrano MJ, Calabrò V, Troncone G, Giovannoni R, Giovannetti E, Malapelle U

05/2025 - Seminars in cancer biology

The exposome and pancreatic cancer, lifestyle and environmental risk factors for PDAC.

Authors: Peduzzi G, Archibugi L, Farinella R, de Leon Pisani RP, Vodickova L, Vodicka P, Kraja B, Sainz J, Bars-Cortina D, Daniel N, Silvestri R, Uysal-Onganer P, Landi S, Dulińska-Litewka J, Comandatore A, Campa D, Hughes DJ, Rizzato C

05/2025 - Seminars in cancer biology

Hair as an Indicator of Prolonged Paraben Exposure and Its Relation to Weight Gain in a Sample of Spanish Children: A Proof-of-Concept Study.

Authors: Gálvez-Ontiveros Y, González-Palacios P, Ramírez V, Monteagudo C, Samaniego-Sánchez C, Rivas A, Zafra-Gómez A

05/2025 - Nutrients

EVs Biodistribution and Antifibrotic Impact in Aged Lung Fibrosis Model.

Authors: Amtil-Ouahdi I, Vergara F, Rio C, González-Martínez C, Jahn A, Forteza-Genestra MA, Gayá A, Calvo J, Sala-Llinas E, Navarrete BA, Romero-Ortiz AD, Monjo M, Ramis JM, Ortega FG

05/2025 - BioFactors (Oxford, England)

Novel IgG and IgA autoantibodies validated in two independent cohorts are associated with disease activity and determine organ manifestations in systemic lupus erythematosus: implications for anti-LIN28A, anti-HMGN5, anti-IRF5, and anti-TGIF1.

Authors: Lindblom J, Lagutkin D, Sherina N, Idborg H, Beretta L, Borghi MO, PRECISESADS Clinical Consortium, Peyper JM, Barturen G, Jakobsson PJ, Alarcón-Riquelme ME, Nikolopoulos D, Parodis I

05/2025 - Annals of the rheumatic diseases

Peak analysis of cell-free RNA finds recurrently protected narrow regions with clinical potential.

Authors: Bao P, Wang T, Liu X, Xing S, Ruan H, Ma H, Tao Y, Zhan Q, Belmonte-Reche E, Qin L, Han Z, Mao M, Li M, Lu ZJ

05/2025 - Genome biology

Tailoring CAR surface density and dynamics to improve CAR-T cell therapy.

Authors: Hinckley-Boned A, Barbero-Jiménez C, Tristán-Manzano M, Maldonado-Perez N, Hudecek M, Justicia-Lirio P, Martin F

04/2025 - Journal for immunotherapy of cancer

Donor insertion into CX3CR1 allows epigenetic modulation of a constitutive promoter on hematopoietic stem cells and its activation upon myeloid differentiation.

Authors: Ramos-Hernández I, Fuster-García C, Aguilar-González A, Lozano-Vinagre ML, Guenechea-Amurrio G, Sanchez-Luque FJ, Gonçalves MAFV, Cathomen T, Muñoz P, Molina-Estévez FJ, Martín F

04/2025 - Nucleic acids research

A Combined Approach Using T2*-Weighted Dynamic Susceptibility Contrast MRI Perfusion Parameters and Radiomics to Differentiate Between Radionecrosis and Glioma Progression: A Proof-of-Concept Study.

Authors: Martínez Barbero JP, García FJP, López Cornejo D, García Cerezo M, Gutiérrez PMJ, Balderas L, Lastra M, Arauzo-Azofra A, Benítez JM, Ramos-Bossini AJL

04/2025 - Life (Basel, Switzerland)

Oncogenic KRAS(G12D) Transfer from Platelet-like Particles Enhances Proliferation and Survival in Non-Small Cell Lung Cancer Cells.

Authors: Ceron-Hernandez J, Martinez-Navajas G, Sanchez-Manas JM, Molina MP, Xie J, Aznar-Peralta I, Garcia-Diaz A, Perales S, Torres C, Serrano MJ, Real PJ

04/2025 - International journal of molecular sciences

Functional Characterization of miR-216a-5p and miR-125a-5p on Pancreatic Cancer Stem Cells.

Authors: Fenu G, Griñán-Lisón C, Etzi F, González-Titos A, Pisano A, Toledo B, Farace C, Sabalic A, Carrillo E, Marchal JA, Madeddu R

03/2025 - International journal of molecular sciences

Crosstalk Between Autophagy and Oxidative Stress in Hematological Malignancies: Mechanisms, Implications, and Therapeutic Potential.

Authors: Cabrera-Serrano AJ, Sánchez-Maldonado JM, González-Olmedo C, Carretero-Fernández M, Díaz-Beltrán L, Gutiérrez-Bautista JF, García-Verdejo FJ, Gálvez-Montosa F, López-López JA, García-Martín P, Pérez EM, Sánchez-Rovira P, Reyes-Zurita FJ, Sainz J

02/2025 - Antioxidants (Basel, Switzerland)

Electrochemical immunoplatform for the quantification of epithelial extracellular vesicles applied to prostate cancer diagnosis.

Authors: Felici E, González-Martínez C, Griñán TV, Gato-Zambrano S, Pereira SV, Fernández-Baldo MA, Ortega-Sanchez FG

10/2025 - Talanta

The Value of Cerebral Blood Volume Derived from Dynamic Susceptibility Contrast Perfusion MRI in Predicting IDH Mutation Status of Brain Gliomas-A Systematic Review and Meta-Analysis.

Authors: Martínez Barbero JP, Pérez García FJ, Jiménez Gutiérrez PM, García Cerezo M, López Cornejo D, Olivares Granados G, Benítez JM, Láinez Ramos-Bossini AJ

04/2025 - Diagnostics (Basel, Switzerland)

Long-read genome and RNA sequencing resolve a pathogenic intronic germline LINE-1 insertion in APC.

Authors: Baumann AA, Knol LI, Arlt M, Hutschenreiter T, Richter A, Widmann TJ, Franke M, Hackmann K, Winkler S, Richter D, Spier I, Aretz S, Aust D, Porrmann J, William D, Schröck E, Glimm H, Jahn A

04/2025 - NPJ genomic medicine

A novel colorimetric assay for early differentiation of mucocutaneous and cutaneous leishmaniasis via species-specific identification.

Authors: Villao NV, Tabraue-Chavez M, Megino-Luque C, Aguilar-Gonzalez A, Guardia-Monteagudo JJ, Lopez-Delgado FJ, Robles-Remacho A, Cano-Cortés V, Diaz-Mochon JJ, Sanchez-Martin RM, Pernagallo S

10/2025 - Talanta

Exploring Trisubstituted adenine derivatives as adenosine A(1) receptor ligands with antagonist activity: Synthesis, biological evaluation and molecular modelling.

Authors: Córdoba-Gómez LB, Lorente-Macías Á, Loza MI, Brea J, Martínez AL, Mok J, King B, Franco-Montalban F, García AG, Guardia-Monteagudo JJ, Matos MJ, Unciti-Broceta A, Díaz-Mochón JJ, Las Infantas MJP

06/2025 - Bioorganic chemistry

An Overview and Comparative Analysis of CRISPR-SpCas9 gRNA Activity Prediction Tools.

Authors: Yuan H, Song C, Xu H, Sun Y, Anthon C, Bolund L, Lin L, Benabdellah K, Lee C, Hou Y, Gorodkin J, Luo Y

04/2025 - The CRISPR journal

DGCR8 haploinsufficiency leads to primate-specific RNA dysregulation and pluripotency defects.

Authors: Colomer-Boronat A, Knol LI, Peris G, Sanchez L, Peluso S, Tristan-Ramos P, Gazquez-Gutierrez A, Chin P, Gordon K, Barturen G, Hill RE, Sanchez-Luque FJ, Garcia-Perez JL, Ivens A, Macias S, Heras SR

03/2025 - Nucleic acids research

Variability of COVID-19 mortality in Honduras: influence of sociodemographic factors.

Authors: Escoto Rodríguez VC, Expósito Ruiz M

03/2025 - International journal for equity in health

Cancer Vaccines and Beyond: The Transformative Role of Nanotechnology in Immunotherapy.

Authors: Delgado-Almenta V, Blaya-Cánovas JL, Calahorra J, López-Tejada A, Griñán-Lisón C, Granados-Principal S

02/2025 - Pharmaceutics

Exploring miR-21 Knock-Out Using CRISPR/Cas as a Treatment for Lung Cancer.

Authors: Lara P, Aguilar-González A, Martín F, Mesas C, Moreno J, Rama AR

01/2025 - Genes

Advanced delivery systems for gene editing: A comprehensive review from the GenE-HumDi COST Action Working Group.

Authors: Cavazza A, Molina-Estévez FJ, Reyes ÁP, Ronco V, Naseem A, Malenšek Š, Pečan P, Santini A, Heredia P, Aguilar-González A, Boulaiz H, Ni Q, Cortijo-Gutierrez M, Pavlovic K, Herrera I, de la Cerda B, Garcia-Tenorio EM, Richard E, Granados-Principal S, López-Márquez A, Köber M, Stojanovic M, Vidaković M, Santos-Garcia I, Blázquez L, Haughton E, Yan D, Sánchez-Martín RM, Mazini L, Aseguinolaza GG, Miccio A, Rio P, Desviat LR, Gonçalves MAFV, Peng L, Jiménez-Mallebrera C, Molina FM, Gupta D, Lainšček D, Luo Y, Benabdellah K

01/2025 - Molecular therapy. Nucleic acids

The histone deacetylase inhibitor Scriptaid targets G-quadruplexes.

Authors: Sanchez-Martin V, Ruzic D, Tello-Lopez MJ, Ortiz-Morales A, Murciano-Calles J, Soriano M, Nikolic K, Garcia-Salcedo JA

02/2025 - Open biology

Transcriptomics and epigenomics datasets of primary brain cancers in formalin-fixed paraffin embedded format.

Authors: García-Heredia A, Guerra-Núñez L, Martín-Climent P, Rojas E, López-Domínguez R, Alcántara-Domínguez C, Alenda C, Valor LM

02/2025 - Scientific data

Enhancing Genetic Studies on Rheumatic Diseases in Latin America: The IARGE-RD Initiative.

Authors: Durán J, Pons-Estel BA, Alarcón-Riquelme ME, Díaz Peña R, IARGE-RD Consortium

02/2025 - The Journal of rheumatology

Virtual patients inspired by multiomics predict the efficacy of an anti-IFNα mAb in cutaneous lupus.

Authors: Hurez V, Gauderat G, Soret P, Myers R, Dasika K, Sheehan R, Friedrich C, Reed M, Laigle L, Riquelme MA, Aussy A, Chadli L, Hubert S, Desvaux E, Fouliard S, Moingeon P, PRECISESADS Clinical Consortium

01/2025 - iScience

New N-Alkylketonetetrahydroisoquinoline derivatives exhibits antitumor effect by HA-CD44 interaction inhibition in MDA-MB-231 breast cancer.

Authors: Chayah M, Espejo-Román JM, Erviti-Marticorena L, Huertas-Camarasa F, Domene C, Sánchez-Martín RM, Conejo-García A, Cruz-López O

03/2025 - Bioorganic chemistry

Hydroxytyrosol, a Component of Olive Oil for Breast Cancer Prevention in Women at High Risk of Cancer.

Authors: Puri A, Yin Z, Granados-Principal S, Ensor J, Guzman L, Rosato R, Zhao H, Wong S, Wang L, Patel T, Chang JC

01/2025 - International journal of breast cancer

Role of the International Society of Liquid Biopsy (ISLB) in establishing quality control frameworks for clinical integration.

Authors: Fusco N, Jantus-Lewintre E, Serrano MJ, Gandara D, Malapelle U, Rolfo C

05/2025 - Critical reviews in oncology/hematology

Dendritic Platinum Nanoparticles Shielded by Pt-S PEGylation as Intracellular Reactors for Bioorthogonal Uncaging Chemistry.

Authors: Garcia-Peiro JI, Ortega-Liebana MC, Adam C, Lorente-Macías Á, Travnickova J, Patton EE, Guerrero-López P, Garcia-Aznar JM, Hueso JL, Santamaria J, Unciti-Broceta A

04/2025 - Angewandte Chemie (International ed. in English)

BiomiX, a user-friendly bioinformatic tool for democratized analysis and integration of multiomics data.

Authors: Iperi C, Fernández-Ochoa Á, Barturen G, Pers JO, Foulquier N, Bettacchioli E, Alarcón-Riquelme M, PRECISESADS Flow Cytometry Study Group, PRECISESADS Clinical Consortium, Cornec D, Bordron A, Jamin C

01/2025 - BMC bioinformatics

De novo lipogenesis protects dormant breast cancer cells from ferroptosis and promotes metastasis.

Authors: Puente-Cobacho B, Esteo C, Altea-Manzano P, Garcia-Perez JL, Quiles JL, Sanchez-Rovira P, Martín-Salvago MD, Molina-Jiménez L, Luque RJ, Fendt SM, Vera-Ramirez L

03/2025 - Redox biology

Evaluating MicroRNAs as diagnostic tools for lymph node metastasis in breast cancer: Findings from a systematic review and meta-analysis.

Authors: Martínez CG, Therapontos S, Lorente JA, Lucena MA, Ortega FG, Serrano MJ

03/2025 - Critical reviews in oncology/hematology

Revisiting the heterogeneity of interferon-related autoimmune diseases.

Authors: Barturen G, Alarcón-Riquelme ME

01/2025 - Nature reviews. Rheumatology

Resectable Non-Small Cell Lung Cancer Heterogeneity and Recurrence Assessed by Tissue Next-Generation Sequencing Genotyping and Circulating Tumor Cell EZH2 Characterization.

Authors: Garcia-Diaz A, Moyano-Rodríguez MJ, Garrido-Navas MDC, de Miguel-Perez D, Expósito-Hernández J, Alcázar-Navarrete B, Ortuño F, Landeira D, Romero PJ, Garcia-Moreno A, Lorente JA, Lopez-Hidalgo J, Bayarri-Lara C, Serrano MJ

03/2025 - Archivos de bronconeumologia

Polymorphisms within autophagy-related genes as susceptibility biomarkers for pancreatic cancer: A meta-analysis of three large European cohorts and functional characterization.

Authors: Gálvez-Montosa F, Peduzzi G, Sanchez-Maldonado JM, Ter Horst R, Cabrera-Serrano AJ, Gentiluomo M, Macauda A, Luque N, Ünal P, García-Verdejo FJ, Li Y, López López JA, Stein A, Bueno-de-Mesquita HB, Arcidiacono PG, Zanette DL, Kahlert C, Perri F, Soucek P, Talar-Wojnarowska R, Theodoropoulos GE, Izbicki JR, Tamás H, Van Laarhoven H, Nappo G, Petrone MC, Lovecek M, Vermeulen RCH, Adamonis K, Reyes-Zurita FJ, Holleczek B, Sumskiene J, Mohelníková-Duchoňová B, Lawlor RT, Pezzilli R, Aoki MN, Pasquali C, Petrenkiene V, Basso D, Bunduc S, Comandatore A, Brenner H, Ermini S, Vanella G, Goetz MR, Archibugi L, Lucchesi M, Uzunoglu FG, Busch O, Milanetto AC, Puzzono M, Kupcinskas J, Morelli L, Sperti C, Carrara S, Capurso G, van Eijck CHJ, Oliverius M, Roth S, Tavano F, Kaaks R, Szentesi A, Vodickova L, Luchini C, Schöttker B, Landi S, Dohan O, Tacelli M, Greenhalf W, Gazouli M, Neoptolemos JP, Cavestro GM, Boggi U, Latiano A, Hegyi P, Ginocchi L, Netea MG, Sánchez-Rovira P, Canzian F, Campa D, Sainz J

01/2025 - International journal of cancer

The Importance of Cajal's and Lorente de Nó's Neuroscience to the Birth of Cybernetics.

Authors: Espinosa-Sanchez JM, Gomez-Marin A, de Castro F

02/2025 - The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry

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